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Gm5089 Gene Detail
Summary
  • Symbol
    Gm5089
  • Name
    predicted gene 5089
  • Synonyms
    C030005G22Rik
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3644731
    NCBI Gene: 328479
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:122603091-122688558 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 65.95 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1725 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644731
 lncRNA gene Chr14:122602651-122688558 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021670
 protein coding gene Chr14:120346763-120365827 (-)
A/J MGP_AJ_G0021630
 protein coding gene Chr14:115671982-115688877 (-)
AKR/J MGP_AKRJ_G0021606
 protein coding gene Chr14:119413326-119432475 (-)
BALB/cJ MGP_BALBcJ_G0021636
 protein coding gene Chr14:116222340-116238388 (-)
C3H/HeJ MGP_C3HHeJ_G0021414
 protein coding gene Chr14:119308944-119325988 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022076
 protein coding gene Chr14:124964318-124981491 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0019614
 protein coding gene Chr14:111533808-111550736 (-)
CAST/EiJ MGP_CASTEiJ_G0020929
 protein coding gene Chr14:117223417-117242037 (-)
CBA/J MGP_CBAJ_G0021382
 protein coding gene Chr14:129709305-129731395 (-)
DBA/2J MGP_DBA2J_G0021505
 protein coding gene Chr14:115531141-115547218 (-)
FVB/NJ MGP_FVBNJ_G0021483
 protein coding gene Chr14:113884084-113900550 (-)
LP/J MGP_LPJ_G0021573
 protein coding gene Chr14:121254079-121271122 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021510
 protein coding gene Chr14:134695358-134714331 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022099
 protein coding gene Chr14:119012087-119028139 (-)
PWK/PhJ MGP_PWKPhJ_G0020673
 protein coding gene Chr14:112591940-112610039 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020511
 protein coding gene Chr14:115178976-115200065 (-)
WSB/EiJ MGP_WSBEiJ_G0020985
 protein coding gene Chr14:119677872-119695184 (-)



Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    2
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 328479 NCBI Gene Model | MGI Sequence Detail 85468 C57BL/6J ±  kb
transcript NR_033325 RefSeq | MGI Sequence Detail 2008 C57BL/6  
polypeptide A1L3C8 UniProt | EBI | MGI Sequence Detail 106 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:3028045
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory