Gm6491 Pseudogene Detail

Summary

• Symbol
  Gm6491
• Name
  predicted gene 6491

• Feature Type
  pseudogene
• IDs
  MGI:3644773
  NCBI Gene: 624284
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:116434909-116436602 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 49.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  141 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644773	pseudogene	ChrX:116434909-116436602 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014767	pseudogene	ChrX:114349240-114350932 (+)
A/J	MGP_AJ_G0014771	pseudogene	ChrX:114065629-114067314 (+)
AKR/J	MGP_AKRJ_G0014705	pseudogene	ChrX:117739496-117741188 (+)
BALB/cJ	MGP_BALBcJ_G0014723	pseudogene	ChrX:112545366-112547051 (+)
C3H/HeJ	MGP_C3HHeJ_G0014554	pseudogene	ChrX:114662944-114664629 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015206	pseudogene	ChrX:117709941-117711723 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012870	pseudogene	ChrX:110350503-110352160 (+)
CAST/EiJ	MGP_CASTEiJ_G0014173	pseudogene	ChrX:98452914-98454606 (+)
CBA/J	MGP_CBAJ_G0014547	pseudogene	ChrX:121436983-121438668 (+)
DBA/2J	MGP_DBA2J_G0014631	pseudogene	ChrX:113323206-113324898 (+)
FVB/NJ	MGP_FVBNJ_G0014610	pseudogene	ChrX:112696735-112698370 (+)
LP/J	MGP_LPJ_G0014723	pseudogene	ChrX:115239452-115241144 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014658	pseudogene	ChrX:127341434-127343126 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015177	pseudogene	ChrX:113859157-113860849 (+)
PWK/PhJ	MGP_PWKPhJ_G0013976	pseudogene	ChrX:95829238-95830952 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013769	pseudogene	ChrX:99214724-99216410 (+)
WSB/EiJ	MGP_WSBEiJ_G0014254	pseudogene	ChrX:112537710-112539403 (+)

Homology

• Gene Tree
  Gm6491
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083345 (Evidence)
• NCBI Gene
  624284

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083345	Ensembl Gene Model | MGI Sequence Detail	1694	C57BL/6J
transcript	ENSMUST00000118273	Ensembl | MGI Sequence Detail	990	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;