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Nat8b-ps Pseudogene Detail
Summary
  • Symbol
    Nat8b-ps
  • Name
    N-acetyltransferase 8B, pseudogene
  • Synonyms
    Nat8b
  • Feature Type
    pseudogene
  • IDs
    MGI:3644831
    NCBI Gene: 434057
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:85909663-85910361 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 37.54 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    146 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644831
 pseudogene Chr6:85909539-85910364 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013589
 pseudogene Chr6:87176971-87177668 (-)
A/J MGP_AJ_G0013569
 pseudogene Chr6:83822289-83822986 (-)
AKR/J MGP_AKRJ_G0013531
 pseudogene Chr6:86255014-86257542 (-)
BALB/cJ MGP_BALBcJ_G0013549
 pseudogene Chr6:83808690-83813956 (-)
C3H/HeJ MGP_C3HHeJ_G0013387
 pseudogene Chr6:98216177-98216814 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013937
 pseudogene Chr6:89545932-89553454 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011971
 pseudogene Chr6:81922023-81922721 (-)
CAST/EiJ MGP_CASTEiJ_G0013091
 pseudogene Chr6:86295479-86296177 (-)
CBA/J MGP_CBAJ_G0013369
 pseudogene Chr6:93068103-93068800 (-)
DBA/2J MGP_DBA2J_G0013449
 pseudogene Chr6:83142728-83143425 (-)
FVB/NJ MGP_FVBNJ_G0013449
 pseudogene Chr6:82317958-82318655 (-)
LP/J MGP_LPJ_G0013525
 pseudogene Chr6:87199918-87217360 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013461
 pseudogene Chr6:97223914-97224913 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013928
 pseudogene Chr6:86085589-86086205 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0012676
 pseudogene Chr6:84907754-84934139 (-)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    NAT8, N-acetyltransferase 8 (putative)
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NAT8, N-acetyltransferase 8 (putative)
  • Synonyms
    ATase2, CCNAT, CML1, GLA, Hcml1, TSC501, TSC510
  • Links
    NCBI Gene ID: 9027
    neXtProt AC: NX_Q9UHE5
    UniProt: Q9UHE5

  • Chr Location
    2p13.1; chr2:73640723-73642422 (-)  GRCh38
  • Human Ortholog
    NAT8B, N-acetyltransferase 8B (putative, gene/pseudogene)
  • Synonyms
    CML2, Hcml2, NAT8BP
  • Links
    NCBI Gene ID: 51471
    neXtProt AC: NX_Q9UHF3
    UniProt: Q9UHF3

  • Chr Location
    2p13.1; chr2:73700509-73702125 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    18
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000089634 Ensembl Gene Model | MGI Sequence Detail 699 C57BL/6J ±  kb
transcript ENSMUST00000162660 Ensembl | MGI Sequence Detail 699 Not Applicable  
polypeptide E0CYC6 UniProt | EBI | MGI Sequence Detail 232 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
References
more
  • Summaries
    All 13
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory