Gm8330 Pseudogene Detail

Summary

• Symbol
  Gm8330
• Name
  predicted gene 8330

• Feature Type
  pseudogene
• IDs
  MGI:3644864
  NCBI Gene: 666859
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:13766390-13767397 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 5.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  170 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3644864	pseudogene	Chr10:13766195-13767415 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010494	pseudogene	Chr10:11337705-11338712 (-)
A/J	MGP_AJ_G0010484	pseudogene	Chr10:10895116-10896123 (-)
AKR/J	MGP_AKRJ_G0010450	pseudogene	Chr10:11152155-11153162 (-)
BALB/cJ	MGP_BALBcJ_G0010457	pseudogene	Chr10:10922653-10924760 (-)
C3H/HeJ	MGP_C3HHeJ_G0010389	pseudogene	Chr10:11322147-11323154 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010207	pseudogene	Chr10:11202591-11205664 (-)
CBA/J	MGP_CBAJ_G0010355	pseudogene	Chr10:12077066-12078073 (-)
DBA/2J	MGP_DBA2J_G0010386	pseudogene	Chr10:10828439-10829398 (-)
FVB/NJ	MGP_FVBNJ_G0010410	pseudogene	Chr10:10635212-10636716 (-)
LP/J	MGP_LPJ_G0010476	pseudogene	Chr10:11185861-11186868 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010375	pseudogene	Chr10:11956700-11957707 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010700	pseudogene	Chr10:11048268-11050457 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010277	pseudogene	Chr10:11096445-11097452 (-)

Homology

• Gene Tree
  Gm8330
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  2

• Ensembl
  ENSMUSG00000098048 (Evidence)
• NCBI Gene
  666859

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098048	Ensembl Gene Model | MGI Sequence Detail	1008	C57BL/6J
transcript	ENSMUST00000182754	Ensembl | MGI Sequence Detail	1008	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;