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Gm6101 Pseudogene Detail
Summary
  • Symbol
    Gm6101
  • Name
    predicted gene 6101
  • Feature Type
    pseudogene
  • IDs
    MGI:3644986
    NCBI Gene: 619785
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:4326457-4330742 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 1.65 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    239 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644986
 pseudogene Chr1:4326258-4330742 (-)
129S1/SvImJ MGP_129S1SvImJ_G0009957
 pseudogene Chr1:1275128-1276800 (-)
A/J MGP_AJ_G0009938
 pseudogene Chr1:1358201-1366607 (-)
AKR/J MGP_AKRJ_G0009921
 pseudogene Chr1:1327426-1329700 (-)
BALB/cJ MGP_BALBcJ_G0009926
 pseudogene Chr1:1297849-1302134 (-)
C3H/HeJ MGP_C3HHeJ_G0009854
 pseudogene Chr1:1315273-1320048 (-)
C57BL/6NJ MGP_C57BL6NJ_G0010171
 pseudogene Chr1:1355440-1358339 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008962
 pseudogene Chr1:1086573-1088473 (-)
CAST/EiJ MGP_CASTEiJ_G0009710
 pseudogene Chr1:1491529-1493656 (-)
CBA/J MGP_CBAJ_G0009830
 pseudogene Chr1:1461573-1465854 (-)
DBA/2J MGP_DBA2J_G0009855
 pseudogene Chr1:1277673-1282350 (-)
FVB/NJ MGP_FVBNJ_G0009881
 pseudogene Chr1:1260496-1262168 (-)
LP/J MGP_LPJ_G0009951
 pseudogene Chr1:1462346-1466127 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0009840
 pseudogene Chr1:1559941-1561613 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0010149
 pseudogene Chr1:1287554-1291602 (-)
PWK/PhJ MGP_PWKPhJ_G0009617
 pseudogene Chr1:1209039-1211627 (-)
SPRET/EiJ MGP_SPRETEiJ_G0009434
 pseudogene Chr1:1461363-1463423 (-)
WSB/EiJ MGP_WSBEiJ_G0009775
 pseudogene Chr1:1294326-1296482 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000102948 Ensembl Gene Model | MGI Sequence Detail 4286 C57BL/6J ±  kb
transcript ENSMUST00000195384 Ensembl | MGI Sequence Detail 1867 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
  • Earliest
    J:132348 Zhao Z, et al., Differential binding of cross-reactive anti-DNA antibodies to mesangial cells: the role of alpha-actinin. J Immunol. 2006 Jun 15;176(12):7704-14
  • Latest
    J:136508 Fan Q, et al., The relationship among nephrin, podocin, CD2AP, and alpha-actinin might not be a true 'interaction' in podocyte. Kidney Int. 2006 Apr;69(7):1207-15
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory