Gm5429 Gene Detail

Summary

• Symbol
  Gm5429
• Name
  predicted gene 5429

• Feature Type
  unclassified gene
• IDs
  MGI:3645014
  NCBI Gene: 432534
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr11:11414005-11416921 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 6.93 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645014	unclassified gene	Chr11:11414005-11416921 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  3
• UniProt
  1

• NCBI Gene
  432534

Representative Sequences			Length	Strain/Species
transcript	AK040906	GenBank | ENA | DDBJ | MGI Sequence Detail	2925	C57BL/6J
polypeptide	Q8BS09	UniProt | EBI | MGI Sequence Detail	146	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR027867 Spermatogenesis-associated protein 48

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:90438 Mouse Genome Informatics Scientific Curators, Obtaining and loading genome assembly coordinates from NCBI annotations. 2005;

TSS for Gm5429:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100346	Chr11:11414020-11414056 (+)	33 bp