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Krbox5 Gene Detail
Summary
  • Symbol
    Krbox5
  • Name
    KRAB box domain containing 5
  • Synonyms
    EG328280, Gm10037
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645096
    NCBI Gene: 102637366
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:67979225-67992154 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 34.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    588 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645096
 protein coding gene Chr13:67979120-67992998 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0020681
 protein coding gene Chr13:65599933-65607916 (+)
AKR/J MGP_AKRJ_G0020656
 protein coding gene Chr13:67790656-67798642 (+)
BALB/cJ MGP_BALBcJ_G0020678
 protein coding gene Chr13:66152987-66160972 (+)
C3H/HeJ MGP_C3HHeJ_G0020473
 protein coding gene Chr13:67434345-67441139 (+)
C57BL/6NJ MGP_C57BL6NJ_G0021115
 protein coding gene Chr13:70443124-70452287 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0019964
 protein coding gene Chr13:65855462-66709149 (+)
CBA/J MGP_CBAJ_G0020431
 protein coding gene Chr13:73032567-73044453 (+)
DBA/2J MGP_DBA2J_G0020557
 protein coding gene Chr13:65493345-65512502 (+)
FVB/NJ MGP_FVBNJ_G0020537
 protein coding gene Chr13:64493060-64512459 (+)
LP/J MGP_LPJ_G0020629
 protein coding gene Chr13:68326812-68334944 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020565
 protein coding gene Chr13:71828487-71839891 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0021154
 protein coding gene Chr13:67054116-67063836 (+)
PWK/PhJ MGP_PWKPhJ_G0019719
 protein coding gene Chr13:63696986-64435153 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019545
 protein coding gene Chr13:63291508-64100293 (+)
WSB/EiJ MGP_WSBEiJ_G0020025
 protein coding gene Chr13:66714005-67560685 (+)



Homology
more
  • Human Ortholog
    KRBOX5, KRAB box domain containing 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRBOX5, KRAB box domain containing 5
  • Synonyms
    ZNF720
  • Links
    NCBI Gene ID: 124411
    neXtProt AC: NX_Q7Z2F6
    UniProt: Q7Z2F6

  • Chr Location
    16p11.2; chr16:31713229-31794869 (+)  GRCh38
  • Human Ortholog
    ZNF738, zinc finger protein 738
  • Links
    NCBI Gene ID: 148203
    UniProt: Q8NE65

  • Chr Location
    19p12; chr19:21358930-21388582 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Genomic Mutations
    1 involving Krbox5
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    8 strains or lines available
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058246 Ensembl Gene Model | MGI Sequence Detail 12930 C57BL/6J ±  kb
transcript ENSMUST00000221266 Ensembl | MGI Sequence Detail 549 Not Applicable  
polypeptide ENSMUSP00000152830 Ensembl | MGI Sequence Detail 91 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR036051 KRAB domain superfamily
    IPR001909 Krueppel-associated box
    IPR050169 Krueppel C2H2-type zinc-finger
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:7513893
References
more
  • Summaries
    All 20
    Phenotypes 5
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory