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Pwwp4c Gene Detail
Summary
  • Symbol
    Pwwp4c
  • Name
    PWWP domain containing 4C
  • Synonyms
    Gm5640
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645126
    NCBI Gene: 434797
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:73682725-73689241 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 38.05 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    53 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645126
 protein coding gene ChrX:73682720-73689729 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035806
 protein coding gene ChrX:69042728-69049991 (+)
A/J MGP_AJ_G0035787
 protein coding gene ChrX:69242792-69246770 (+)
AKR/J MGP_AKRJ_G0035758
 protein coding gene ChrX:72742194-72748653 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0035475
 protein coding gene ChrX:69326553-69527326 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035498
 protein coding gene ChrX:74634127-74640963 (-)
DBA/2J MGP_DBA2J_G0035654
 protein coding gene ChrX:70093101-70099090 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0035693
 protein coding gene ChrX:69691812-69698122 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036375
 protein coding gene ChrX:70495336-70501723 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    PWWP4, PWWP domain containing 4
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PWWP4, PWWP domain containing 4
  • Links
    NCBI Gene ID: 728317
    UniProt: A0A494C071

  • Chr Location
    Xq28; chrX:153266147-153279145 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079534 Ensembl Gene Model | MGI Sequence Detail 6517 C57BL/6J ±  kb
transcript ENSMUST00000114119 Ensembl | MGI Sequence Detail 2861 Not Applicable  
polypeptide ENSMUSP00000109754 Ensembl | MGI Sequence Detail 728 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR035504 MUM1-like, PWWP domain
    IPR040263 PWWP domain-containing DNA repair factor 3A/3B/4
    IPR048795 PWWP domain-containing DNA repair factor 3A/3B/4, C-terminal
    IPR048765 PWWP domain-containing DNA repair factor 3A/3B/4, N-terminal
Other
Accession IDs
less
MGI:6460392
References
more
  • Summaries
    All 9
    Phenotypes 2
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory