Gm8355 Pseudogene Detail

Summary

• Symbol
  Gm8355
• Name
  predicted pseudogene 8355

• Feature Type
  pseudogene
• IDs
  MGI:3645191
  NCBI Gene: 666904
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:14621106-14623046 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 5.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  140 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645191	pseudogene	Chr10:14621022-14623124 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0009997	pseudogene	Chr1:7847595-7848234 (-)
A/J	MGP_AJ_G0010102	pseudogene	Chr1:45428165-45428820 (+)
AKR/J	MGP_AKRJ_G0009958	pseudogene	Chr1:7767379-7768658 (-)
BALB/cJ	MGP_BALBcJ_G0010088	pseudogene	Chr1:43873666-43874323 (+)
C3H/HeJ	MGP_C3HHeJ_G0011963	pseudogene	Chr3:39881299-39881941 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010337	pseudogene	Chr1:47500582-47501239 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008995	pseudogene	Chr1:6695688-6696327 (-)
CAST/EiJ	MGP_CASTEiJ_G0009747	pseudogene	Chr1:7890355-7890994 (-)
CBA/J	MGP_CBAJ_G0011936	pseudogene	Chr3:42821019-42821661 (-)
DBA/2J	MGP_DBA2J_G0010015	pseudogene	Chr1:44744400-44745068 (+)
FVB/NJ	MGP_FVBNJ_G0010037	pseudogene	Chr1:42947548-42948205 (+)
LP/J	MGP_LPJ_G0009988	pseudogene	Chr1:8054304-8054943 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009996	pseudogene	Chr1:51032016-51032673 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010317	pseudogene	Chr1:46466961-46467616 (+)
PWK/PhJ	MGP_PWKPhJ_G0009651	pseudogene	Chr1:7354115-7354754 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009470	pseudogene	Chr1:7851674-7852311 (-)
WSB/EiJ	MGP_WSBEiJ_G0009809	pseudogene	Chr1:7691780-7692419 (-)

Homology

• Gene Tree
  Gm8355
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000093798 (Evidence)
• NCBI Gene
  666904

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093798	Ensembl Gene Model | MGI Sequence Detail	1941	C57BL/6J
transcript	ENSMUST00000177767	Ensembl | MGI Sequence Detail	1941	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8355:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96804	Chr10:14623125-14623127 (-)	-80 bp