Gm8970 Pseudogene Detail

Summary

• Symbol
  Gm8970
• Name
  predicted gene 8970

• Feature Type
  pseudogene
• IDs
  MGI:3645294
  NCBI Gene: 668089
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:110477669-110478584 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 57.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645294	pseudogene	Chr8:110477669-110478584 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  1

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  668089

Representative Sequences			Length	Strain/Species
genomic	668089	NCBI Gene Model | MGI Sequence Detail	916	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Gm8970:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr82858	Chr8:110478881-110478899 (-)	-306 bp