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Gm5590 Pseudogene Detail
Summary
  • Symbol
    Gm5590
  • Name
    predicted gene 5590
  • Feature Type
    pseudogene
  • IDs
    MGI:3645451
    NCBI Gene: 434168
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:39095254-39095598 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 25.48 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    127 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645451
 pseudogene Chr7:39094413-39095607 (-)
129S1/SvImJ MGP_129S1SvImJ_G0039747
 pseudogene Chr7:39076253-39079848 (-)
A/J MGP_AJ_G0039747
 pseudogene Chr7:38156026-38159476 (-)
AKR/J MGP_AKRJ_G0039671
 pseudogene Chr7:39270704-39274158 (-)
BALB/cJ MGP_BALBcJ_G0039715
 pseudogene Chr7:38401658-38405108 (-)
C3H/HeJ MGP_C3HHeJ_G0039377
 pseudogene Chr7:39920821-39924416 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040277
 pseudogene Chr7:40994791-40998182 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0036905
 pseudogene Chr7:38719553-38722877 (-)
CAST/EiJ MGP_CASTEiJ_G0038495
 pseudogene Chr7:31019914-31023574 (-)
CBA/J MGP_CBAJ_G0039349
 pseudogene Chr7:42296860-42300455 (-)
DBA/2J MGP_DBA2J_G0039543
 pseudogene Chr7:38069908-38073298 (-)
FVB/NJ MGP_FVBNJ_G0039501
 pseudogene Chr7:37840104-37843554 (-)
LP/J MGP_LPJ_G0039582
 pseudogene Chr7:39457607-39461203 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0039502
 pseudogene Chr7:41095700-41099150 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040379
 pseudogene Chr7:38618464-38621854 (-)
PWK/PhJ MGP_PWKPhJ_G0038171
 pseudogene Chr7:31086963-31090462 (-)
SPRET/EiJ MGP_SPRETEiJ_G0037918
 pseudogene Chr7:27231684-27235136 (-)
WSB/EiJ MGP_WSBEiJ_G0038730
 pseudogene Chr7:39060232-39063624 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046372 Ensembl Gene Model | MGI Sequence Detail 345 C57BL/6J ±  kb
transcript ENSMUST00000059110 Ensembl | MGI Sequence Detail 345 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 7
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory