Gm6322 Pseudogene Detail

Summary

• Symbol
  Gm6322
• Name
  predicted gene 6322

• Feature Type
  pseudogene
• IDs
  MGI:3645541
  NCBI Gene: 622432
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:138576836-138578238 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 61.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645541	pseudogene	ChrX:138576636-138578256 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014860	pseudogene	ChrX:137180774-137182118 (-)
A/J	MGP_AJ_G0014854	pseudogene	ChrX:136563872-136566830 (-)
AKR/J	MGP_AKRJ_G0014794	pseudogene	ChrX:140958577-140960868 (-)
BALB/cJ	MGP_BALBcJ_G0014808	pseudogene	ChrX:134913005-134914978 (-)
C3H/HeJ	MGP_C3HHeJ_G0014644	pseudogene	ChrX:137209622-137212333 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015297	pseudogene	ChrX:141223784-141224959 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012940	pseudogene	ChrX:128319034-128320407 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0014633	pseudogene	ChrX:145534278-145538798 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0014700	pseudogene	ChrX:134975319-134976729 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0014745	pseudogene	ChrX:153057243-153058488 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015278	pseudogene	ChrX:136497750-136498952 (-)
PWK/PhJ	MGP_PWKPhJ_G0014058	pseudogene	ChrX:114944420-114945874 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013849	pseudogene	ChrX:118549841-118554093 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6322
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000082018 (Evidence)
• NCBI Gene
  622432

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082018	Ensembl Gene Model | MGI Sequence Detail	1403	C57BL/6J
transcript	ENSMUST00000118789	Ensembl | MGI Sequence Detail	1004	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;