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Gemin6-ps Pseudogene Detail
Summary
  • Symbol
    Gemin6-ps
  • Name
    gem nuclear organelle associated protein 6, pseudogene
  • Synonyms
    Gm6253
Location &
Maps
more
  • Sequence Map
    Chr6:117785681-117786181 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 55.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645567
 pseudogene Chr6:117785610-117786522 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013669
 pseudogene Chr6:120511873-120512373 (+)
A/J MGP_AJ_G0013654
 pseudogene Chr6:115914704-115915204 (+)
AKR/J MGP_AKRJ_G0013617
 pseudogene Chr6:119023262-119023762 (+)
BALB/cJ MGP_BALBcJ_G0013633
 pseudogene Chr6:115686721-115687221 (+)
C3H/HeJ MGP_C3HHeJ_G0013305
 pseudogene Chr6:65278383-65278883 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014021
 pseudogene Chr6:123618391-123618891 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0009750
 pseudogene Chr12:3307067-3307567 (-)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0013452
 pseudogene Chr6:128479336-128479836 (+)
DBA/2J MGP_DBA2J_G0013531
 pseudogene Chr6:114814845-114816862 (+)
FVB/NJ MGP_FVBNJ_G0013531
 pseudogene Chr6:113945230-113946624 (+)
LP/J MGP_LPJ_G0013608
 pseudogene Chr6:120542847-120543347 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013545
 pseudogene Chr6:132611206-132611778 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0014014
 pseudogene Chr6:119057481-119060052 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0013221
 pseudogene Chr6:119316081-119316581 (+)



Homology
more
  • Human Ortholog
    GEMIN6, gem nuclear organelle associated protein 6
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GEMIN6, gem nuclear organelle associated protein 6
  • Links
    NCBI Gene ID: 79833
    neXtProt AC: NX_Q8WXD5
    UniProt: Q8WXD5

  • Chr Location
    2p22.1; chr2:38751534-38785002 (+)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000071237 Ensembl Gene Model | MGI Sequence Detail 501 C57BL/6J ±  kb
transcript ENSMUST00000120444 Ensembl | MGI Sequence Detail 501 Not Applicable  
polypeptide XP_036008356 RefSeq | MGI Sequence Detail 166 C57BL/6J  
For the selected sequence
Other
Accession IDs
less
MGI:5887111
References
more
  • Summaries
    All 5
    Gene Ontology 1
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:164563 The Gene Ontology Consortium, Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs. 2010 Oct;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory