Tprgl-ps2 Pseudogene Detail

Summary

• Symbol
  Tprgl-ps2
• Name
  transformation related protein 63 regulated like, pseudogene 2
• Synonyms
  Gm8018

• Feature Type
  pseudogene
• IDs
  MGI:3645629
  NCBI Gene: 100418036
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:84528763-84531733 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  222 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645629	pseudogene	Chr7:84528763-84532628 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040603	pseudogene	Chr7:87058674-87062529 (+)
A/J	MGP_AJ_G0040601	pseudogene	Chr7:84965018-84968417 (+)
AKR/J	MGP_AKRJ_G0040531	pseudogene	Chr7:86944401-86948253 (+)
BALB/cJ	MGP_BALBcJ_G0040592	pseudogene	Chr7:84639466-84641835 (+)
C3H/HeJ	MGP_C3HHeJ_G0040229	pseudogene	Chr7:87465405-87468349 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041281	pseudogene	Chr7:90474416-90481103 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037455	pseudogene	Chr7:87297970-87300128 (+)
CAST/EiJ	MGP_CASTEiJ_G0039275	pseudogene	Chr7:78463495-78467871 (+)
CBA/J	MGP_CBAJ_G0040196	pseudogene	Chr7:93455142-93458189 (+)
DBA/2J	MGP_DBA2J_G0040408	pseudogene	Chr7:83475125-83477671 (+)
FVB/NJ	MGP_FVBNJ_G0040335	pseudogene	Chr7:83421017-83423326 (+)
LP/J	MGP_LPJ_G0040447	pseudogene	Chr7:88325938-88328486 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040331	pseudogene	Chr7:93487866-93492847 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041333	pseudogene	Chr7:86304144-86307337 (+)
PWK/PhJ	MGP_PWKPhJ_G0038942	pseudogene	Chr7:76724444-76727261 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039527	pseudogene	Chr7:86690753-86693518 (+)

Homology

• Gene Tree
  Tprgl-ps2
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  24 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Tprgl-ps2
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000092425 (Evidence)
• NCBI Gene
  100418036

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092425	Ensembl Gene Model | MGI Sequence Detail	2971	C57BL/6J
transcript	ENSMUST00000173536	Ensembl | MGI Sequence Detail	789	Not Applicable

Other
Accession IDs

MGI:6431139

References

• Summaries
  All 28

  Phenotypes 24
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67