Gm8661 Pseudogene Detail

Summary

• Symbol
  Gm8661
• Name
  predicted gene 8661

• Feature Type
  pseudogene
• IDs
  MGI:3645695
  NCBI Gene: 667486
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:100507027-100508018 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 52.80 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645695	pseudogene	Chr9:100506813-100508035 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014236	pseudogene	Chr9:102072252-102073243 (-)
A/J	MGP_AJ_G0014252	pseudogene	Chr9:98467768-98468759 (-)
AKR/J	MGP_AKRJ_G0014177	pseudogene	Chr9:100873012-100874003 (-)
BALB/cJ	MGP_BALBcJ_G0014202	pseudogene	Chr9:98146229-98147220 (-)
C3H/HeJ	MGP_C3HHeJ_G0014033	pseudogene	Chr9:101290474-101291465 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014655	pseudogene	Chr9:104989582-104990573 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012465	pseudogene	Chr9:96109325-96110290 (-)
CAST/EiJ	MGP_CASTEiJ_G0013688	pseudogene	Chr9:101085687-101086678 (-)
CBA/J	MGP_CBAJ_G0014014	pseudogene	Chr9:108630599-108631590 (-)
DBA/2J	MGP_DBA2J_G0014099	pseudogene	Chr9:97947542-97948533 (-)
FVB/NJ	MGP_FVBNJ_G0014098	pseudogene	Chr9:96761873-96762864 (-)
LP/J	MGP_LPJ_G0014186	pseudogene	Chr9:102296369-102297360 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014133	pseudogene	Chr9:110502207-110503198 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014626	pseudogene	Chr9:101130018-101131009 (-)
PWK/PhJ	MGP_PWKPhJ_G0013501	pseudogene	Chr9:98177025-98178016 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0013747	pseudogene	Chr9:100987106-100988097 (-)

Homology

• Gene Tree
  Gm8661
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8661
• Find Mice (IMSR)
  15 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000086225 (Evidence)
• NCBI Gene
  667486

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086225	Ensembl Gene Model | MGI Sequence Detail	992	C57BL/6J
transcript	ENSMUST00000118688	Ensembl | MGI Sequence Detail	992	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;