Gm7984 Pseudogene Detail

Summary

• Symbol
  Gm7984
• Name
  predicted gene 7984

• Feature Type
  pseudogene
• IDs
  MGI:3645839
  NCBI Gene: 666211
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:76125139-76125676 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 35.65 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645839	pseudogene	Chr8:76125136-76126113 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036475	pseudogene	Chr8:75875066-75875607 (+)
A/J	MGP_AJ_G0036461	pseudogene	Chr8:72869780-72870317 (+)
AKR/J	MGP_AKRJ_G0036411	pseudogene	Chr8:75102761-75103298 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0036144	pseudogene	Chr8:75667044-75667581 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0036964	pseudogene	Chr8:78782611-78783847 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034073	pseudogene	Chr9:23430018-23430542 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0036116	pseudogene	Chr8:81582926-81583467 (+)
DBA/2J	MGP_DBA2J_G0036292	pseudogene	Chr8:72570610-72571151 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0036342	pseudogene	Chr8:75987764-75988301 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036247	pseudogene	Chr8:84123081-84123660 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037078	pseudogene	Chr8:75060416-75060957 (+)
PWK/PhJ	MGP_PWKPhJ_G0035033	pseudogene	Chr8:71825886-71831675 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0034861	pseudogene	Chr9:25114362-25114884 (+)
WSB/EiJ	MGP_WSBEiJ_G0035534	pseudogene	Chr8:75380521-75381062 (+)

Homology

• Gene Tree
  Gm7984
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm7984
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000049891 (Evidence)
• NCBI Gene
  666211

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000049891	Ensembl Gene Model | MGI Sequence Detail	538	C57BL/6J
transcript	ENSMUST00000060640	Ensembl | MGI Sequence Detail	538	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;