Gm8425 Pseudogene Detail

Summary

• Symbol
  Gm8425
• Name
  predicted gene 8425

• Feature Type
  pseudogene
• IDs
  MGI:3645899
  NCBI Gene: 115488618
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:36599196-36599964 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 26.02 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645899	pseudogene	Chr16:36599178-36600005 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0011260	pseudogene	Chr16:33457771-33459868 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0011228	pseudogene	Chr16:33561121-33561894 (+)
C3H/HeJ	MGP_C3HHeJ_G0011125	pseudogene	Chr16:34852384-34853774 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011521	pseudogene	Chr16:36035363-36036700 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010107	pseudogene	Chr16:33822186-33822984 (+)
CAST/EiJ	MGP_CASTEiJ_G0010952	pseudogene	Chr16:34970101-34970869 (+)
CBA/J	MGP_CBAJ_G0011105	pseudogene	Chr16:37600669-37603001 (+)
DBA/2J	MGP_DBA2J_G0011153	pseudogene	Chr16:33350883-33351651 (+)
FVB/NJ	MGP_FVBNJ_G0011156	pseudogene	Chr16:33385359-33386625 (+)
LP/J	MGP_LPJ_G0011248	pseudogene	Chr16:34899125-34899893 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011149	pseudogene	Chr16:36637393-36638180 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011502	pseudogene	Chr16:34681291-34682059 (+)
PWK/PhJ	MGP_PWKPhJ_G0010823	pseudogene	Chr16:33751684-33752673 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010650	pseudogene	Chr16:34601517-34602281 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm8425
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000091786 (Evidence)
• NCBI Gene
  115488618

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091786	Ensembl Gene Model | MGI Sequence Detail	769	C57BL/6J
transcript	ENSMUST00000171395	Ensembl | MGI Sequence Detail	769	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;