Gm6141 Pseudogene Detail

Summary

• Symbol
  Gm6141
• Name
  predicted pseudogene 6141

• Feature Type
  pseudogene
• IDs
  MGI:3646012
  NCBI Gene: 620290
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:19638955-19639702 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 5.61 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  205 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646012	pseudogene	Chr3:19638955-19639706 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012055	pseudogene	Chr3:16789290-16790037 (+)
A/J	MGP_AJ_G0012046	pseudogene	Chr3:16711684-16712431 (+)
AKR/J	MGP_AKRJ_G0012008	pseudogene	Chr3:16866119-16866866 (+)
BALB/cJ	MGP_BALBcJ_G0012023	pseudogene	Chr3:16473363-16474110 (+)
C3H/HeJ	MGP_C3HHeJ_G0011901	pseudogene	Chr3:16899700-16900447 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012328	pseudogene	Chr3:17874384-17875131 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0012070	pseudogene	Chr3:148214504-148223585 (+)
CBA/J	MGP_CBAJ_G0011874	pseudogene	Chr3:18243590-18244337 (+)
DBA/2J	MGP_DBA2J_G0011927	pseudogene	Chr3:16321467-16322214 (+)
FVB/NJ	MGP_FVBNJ_G0011936	pseudogene	Chr3:15976679-15977426 (+)
LP/J	MGP_LPJ_G0012003	pseudogene	Chr3:17435992-17436739 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011938	pseudogene	Chr3:20318996-20319743 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012337	pseudogene	Chr3:16627596-16628343 (+)
PWK/PhJ	MGP_PWKPhJ_G0011909	pseudogene	Chr3:143045806-143055354 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6141
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm6141
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000084339 (Evidence)
• NCBI Gene
  620290

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084339	Ensembl Gene Model | MGI Sequence Detail	748	C57BL/6J
transcript	ENSMUST00000117181	Ensembl | MGI Sequence Detail	695	Not Applicable

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426