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Gm4894 Gene Detail
Summary
  • Symbol
    Gm4894
  • Name
    predicted gene 4894
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3646156
    NCBI Gene: 235327
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:49161831-49191894 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 26.60 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    897 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646156
 lncRNA gene Chr9:49161831-49191894 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034770
 protein coding gene Chr9:48086537-48096748 (+)
A/J MGP_AJ_G0034751
 protein coding gene Chr9:46658458-46669538 (+)
AKR/J MGP_AKRJ_G0034679
 protein coding gene Chr9:47633299-47643510 (+)
BALB/cJ MGP_BALBcJ_G0034743
 protein coding gene Chr9:46376963-46387171 (+)
C3H/HeJ MGP_C3HHeJ_G0034453
 protein coding gene Chr9:48089789-48099997 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035263
 protein coding gene Chr9:49455174-49465385 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032176
 protein coding gene Chr9:46142977-46153216 (+)
CAST/EiJ MGP_CASTEiJ_G0033775
 protein coding gene Chr9:48029026-48039180 (+)
CBA/J MGP_CBAJ_G0034425
 protein coding gene Chr9:51223728-51233939 (+)
DBA/2J MGP_DBA2J_G0034584
 protein coding gene Chr9:46507635-46517795 (+)
FVB/NJ MGP_FVBNJ_G0034525
 protein coding gene Chr9:45754106-45764313 (+)
LP/J MGP_LPJ_G0034665
 protein coding gene Chr9:48465870-48476081 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034569
 protein coding gene Chr9:52885066-52895275 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035284
 protein coding gene Chr9:47584883-47595094 (+)
PWK/PhJ MGP_PWKPhJ_G0033480
 protein coding gene Chr9:46478853-46489094 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033315
 protein coding gene Chr9:47918304-47928464 (+)
WSB/EiJ MGP_WSBEiJ_G0033888
 protein coding gene Chr9:47613818-47624034 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 235327 NCBI Gene Model | MGI Sequence Detail 30064 C57BL/6J ±  kb
transcript NR_177946 RefSeq | MGI Sequence Detail 2294 C57BL/6  
polypeptide Q8CA09 UniProt | EBI | MGI Sequence Detail 118 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Phenotypes 1
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory