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Ube2frt Pseudogene Detail
Summary
  • Symbol
    Ube2frt
  • Name
    ubiquitin-conjugating enzyme E2F (putative), retrotransposed
  • Synonyms
    Gm5434
  • Feature Type
    pseudogene
  • IDs
    MGI:3646221
    NCBI Gene: 432649
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr12:36140378-36141828 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 16.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    154 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646221
 pseudogene Chr12:36140378-36141828 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019688
 protein coding gene Chr12:34311579-34315153 (+)
A/J MGP_AJ_G0019654
 protein coding gene Chr12:33245201-33246646 (+)
AKR/J MGP_AKRJ_G0019625
 protein coding gene Chr12:34276239-34277689 (+)
BALB/cJ MGP_BALBcJ_G0019632
 protein coding gene Chr12:33435867-33437312 (+)
C3H/HeJ MGP_C3HHeJ_G0019436
 protein coding gene Chr12:34196267-34197712 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020079
 protein coding gene Chr12:35273478-35274928 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0018896
 protein coding gene Chr12:6597401-6598377 (+)
CBA/J MGP_CBAJ_G0019408
 protein coding gene Chr12:36456866-36458311 (+)
DBA/2J MGP_DBA2J_G0019521
 protein coding gene Chr12:33089788-33091238 (+)
FVB/NJ MGP_FVBNJ_G0019510
 protein coding gene Chr12:32805914-32807364 (+)
LP/J MGP_LPJ_G0019591
 protein coding gene Chr12:34393517-34394967 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019546
 protein coding gene Chr12:36119662-36121112 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020119
 protein coding gene Chr12:33795069-33796519 (+)
PWK/PhJ MGP_PWKPhJ_G0018662
 protein coding gene Chr12:6372008-6373100 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018546
 protein coding gene Chr12:28427563-28429008 (+)
WSB/EiJ MGP_WSBEiJ_G0018947
 protein coding gene Chr12:6554212-6555190 (+)



Homology
more
  • Human Ortholog
    UBE2F, ubiquitin conjugating enzyme E2 F (putative)
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBE2F, ubiquitin conjugating enzyme E2 F (putative)
  • Synonyms
    NCE2
  • Links
    NCBI Gene ID: 140739
    neXtProt AC: NX_Q969M7
    UniProt: Q969M7

  • Chr Location
    2q37.3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 432649 NCBI Gene Model | MGI Sequence Detail 1451 C57BL/6J ±  kb
transcript NR_003649 RefSeq | MGI Sequence Detail 1451 C57BL/6  
polypeptide Q3UWQ3 UniProt | EBI | MGI Sequence Detail 185 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
Other
Accession IDs
less
MGI:7516366
References
more
  • Summaries
    All 15
    Gene Ontology 5
    Phenotypes 2
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory