Rpl10a-ps2 Pseudogene Detail

Summary

• Symbol
  Rpl10a-ps2
• Name
  ribosomal protein L10A, pseudogene 2
• Synonyms
  Gm5192

• Feature Type
  pseudogene
• IDs
  MGI:3646227
  NCBI Gene: 382723
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:8990372-8991013 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 3.63 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646227	pseudogene	Chr13:8990337-8991024 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010966	pseudogene	Chr13:5560054-5560695 (-)
A/J	MGP_AJ_G0010174	pseudogene	Chr1:62889604-62890245 (-)
AKR/J	MGP_AKRJ_G0010982	pseudogene	Chr13:63670219-63672468 (-)
BALB/cJ	MGP_BALBcJ_G0010943	pseudogene	Chr13:5556088-5556729 (-)
C3H/HeJ	MGP_C3HHeJ_G0010843	pseudogene	Chr13:5735274-5735909 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010727	pseudogene	Chr13:63213030-63213670 (-)
CBA/J	MGP_CBAJ_G0010815	pseudogene	Chr13:6049351-6049986 (-)
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0010874	pseudogene	Chr13:5246915-5247556 (-)
LP/J	MGP_LPJ_G0010948	pseudogene	Chr13:5664570-5665211 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010859	pseudogene	Chr13:6347455-6364941 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011205	pseudogene	Chr13:5566794-5567435 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010772	pseudogene	Chr13:63468583-63469223 (-)

Homology

• Gene Tree
  Rpl10a-ps2
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000061988 (Evidence)
• NCBI Gene
  382723

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000061988	Ensembl Gene Model | MGI Sequence Detail	642	C57BL/6J
transcript	ENSMUST00000071184	Ensembl | MGI Sequence Detail	642	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;