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Rhox2-ps Pseudogene Detail
Summary
  • Symbol
    Rhox2-ps
  • Name
    reproductive homeobox 2, pseudogene
  • Synonyms
    Gm6310
  • Feature Type
    pseudogene
  • IDs
    MGI:3646282
    NCBI Gene: 622311
  • Member of
    Rhox cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:36864574-36865084 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.98 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    105 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646282
 pseudogene ChrX:36864465-36865084 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040676
 pseudogene ChrX:32703088-32703598 (-)
A/J MGP_AJ_G0040675
 pseudogene ChrX:32754575-32755085 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0040664
 pseudogene ChrX:32457277-32457773 (-)
C3H/HeJ MGP_C3HHeJ_G0040301
 pseudogene ChrX:32968894-32969404 (-)
C57BL/6NJ MGP_C57BL6NJ_G0041362
 pseudogene ChrX:33424844-33425354 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037495
 pseudogene ChrX:31149604-31150112 (-)
CAST/EiJ MGP_CASTEiJ_G0039339
 pseudogene ChrX:21044437-21044933 (-)
CBA/J MGP_CBAJ_G0040265
 pseudogene ChrX:34236899-34237490 (-)
DBA/2J MGP_DBA2J_G0040481
 pseudogene ChrX:32583974-32584484 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0040519
 pseudogene ChrX:33065158-33065615 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040403
 pseudogene ChrX:34622207-34622717 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0041410
 pseudogene ChrX:32666003-32666513 (-)
PWK/PhJ MGP_PWKPhJ_G0038994
 pseudogene ChrX:20636547-20637143 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038709
 pseudogene ChrX:21569242-21572179 (-)
WSB/EiJ MGP_WSBEiJ_G0039589
 pseudogene ChrX:32423653-32424163 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081195 Ensembl Gene Model | MGI Sequence Detail 511 C57BL/6J ±  kb
transcript ENSMUST00000117421 Ensembl | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:229199 Song HW, et al., shRNA off-target effects in vivo: impaired endogenous siRNA expression and spermatogenic defects. PLoS One. 2015;10(3):e0118549
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory