Gm16465 Pseudogene Detail

Summary

• Symbol
  Gm16465
• Name
  predicted gene 16465

• Feature Type
  pseudogene
• IDs
  MGI:3646326
  NCBI Gene: 674396
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:90930910-90933171 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 40.54 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646326	pseudogene	ChrX:90930907-90933171 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014606	pseudogene	ChrX:88229052-88231316 (-)
A/J	MGP_AJ_G0014614	pseudogene	ChrX:88332944-88335169 (-)
AKR/J	MGP_AKRJ_G0014538	pseudogene	ChrX:90628985-90631249 (-)
BALB/cJ	MGP_BALBcJ_G0014565	pseudogene	ChrX:87038310-87040563 (-)
C3H/HeJ	MGP_C3HHeJ_G0014398	pseudogene	ChrX:88570444-88574003 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015045	pseudogene	ChrX:90914858-90918273 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009195	pseudogene	Chr1:81537279-81539052 (+)
CAST/EiJ	MGP_CASTEiJ_G0014025	pseudogene	ChrX:73302276-73304529 (-)
CBA/J	MGP_CBAJ_G0014387	pseudogene	ChrX:93507709-93509861 (-)
DBA/2J	MGP_DBA2J_G0014468	pseudogene	ChrX:87598793-87601034 (-)
FVB/NJ	MGP_FVBNJ_G0014455	pseudogene	ChrX:87010985-87013249 (-)
LP/J	MGP_LPJ_G0014565	pseudogene	ChrX:89000992-89003237 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014496	pseudogene	ChrX:97698074-97700315 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015011	pseudogene	ChrX:87928342-87930619 (-)
PWK/PhJ	MGP_PWKPhJ_G0013832	pseudogene	ChrX:71157934-71160198 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013624	pseudogene	ChrX:73842144-73844413 (-)
WSB/EiJ	MGP_WSBEiJ_G0014102	pseudogene	ChrX:86725160-86727398 (-)

Homology

• Gene Tree
  Gm16465
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000083994 (Evidence)
• NCBI Gene
  674396

Representative Sequences			Length	Strain/Species
genomic	674396	NCBI Gene Model | MGI Sequence Detail	2262	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;