Gm6729 Gene Detail

Summary

• Symbol
  Gm6729
• Name
  predicted gene 6729

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3646339
  NCBI Gene: 627035
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:86362161-86377447 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 42.90 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  515 from dbSNP Build 142
• Strain Annotations
  9

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646339	protein coding gene	Chr10:86362161-86377447 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0017590	protein coding gene	Chr10:84722988-84724932 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0017553	protein coding gene	Chr10:84819675-84821126 (-)
C3H/HeJ	MGP_C3HHeJ_G0017376	protein coding gene	Chr10:86984934-86986385 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0017345	protein coding gene	Chr10:94171474-94172925 (-)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0017524	protein coding gene	Chr10:88175389-88176848 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0017473	protein coding gene	Chr10:95941601-95943052 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0018047	protein coding gene	Chr10:86957928-86959379 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0016503	protein coding gene	Chr10:84625548-84627287 (-)
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm6729
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  39
• RefSeq
  25

• Ensembl
  ENSMUSG00000090816 (Evidence), ENSMUSG00000112586 (Evidence)
• NCBI Gene
  627035

Representative Sequences			Length	Strain/Species
genomic	627035	NCBI Gene Model | MGI Sequence Detail	15287	C57BL/6J
transcript	NR_169119	RefSeq | MGI Sequence Detail	6354	C57BL/6
polypeptide	NP_001371153	RefSeq | MGI Sequence Detail	493	C57BL/6

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87