Rpl21-ps3 Pseudogene Detail

Summary

• Symbol
  Rpl21-ps3
• Name
  ribosomal protein L21, pseudogene 3
• Synonyms
  EG432665, Gm10084

• Feature Type
  pseudogene
• IDs
  MGI:3646431
  NCBI Gene: 432665
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:59140841-59141323 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 26.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  7

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646431	pseudogene	Chr12:59140813-59141362 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0010868	pseudogene	Chr12:57959197-57964344 (-)
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0011161	pseudogene	Chr12:60009615-60010798 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0010807	pseudogene	Chr12:56085198-56085600 (-)
FVB/NJ	MGP_FVBNJ_G0010819	pseudogene	Chr12:55359194-55359689 (-)
LP/J	MGP_LPJ_G0010892	pseudogene	Chr12:58331247-58331725 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011145	pseudogene	Chr12:57399158-57399577 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Rpl21-ps3
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Rpl21-ps3
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  11
• RefSeq
  1

• Ensembl
  ENSMUSG00000060566 (Evidence)
• NCBI Gene
  432665

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000060566	Ensembl Gene Model | MGI Sequence Detail	483	C57BL/6J
transcript	ENSMUST00000080223	Ensembl | MGI Sequence Detail	483	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;