Gm7701 Pseudogene Detail

Summary

• Symbol
  Gm7701
• Name
  predicted gene 7701

• Feature Type
  pseudogene
• IDs
  MGI:3646506
  NCBI Gene: 665586
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr18:24390435-24391913 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 12.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646506	pseudogene	Chr18:24390287-24392113 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011425	pseudogene	Chr18:21991633-21993111 (+)
A/J	MGP_AJ_G0011420	pseudogene	Chr18:21396905-21398385 (+)
AKR/J	MGP_AKRJ_G0011383	pseudogene	Chr18:22047826-22049304 (+)
BALB/cJ	MGP_BALBcJ_G0011398	pseudogene	Chr18:21440613-21442091 (+)
C3H/HeJ	MGP_C3HHeJ_G0011286	pseudogene	Chr18:21977900-21979380 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011688	pseudogene	Chr18:22929136-22930614 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010247	pseudogene	Chr18:21260388-21261896 (+)
CAST/EiJ	MGP_CASTEiJ_G0011094	pseudogene	Chr18:21767572-21769050 (+)
CBA/J	MGP_CBAJ_G0011262	pseudogene	Chr18:23558540-23560020 (+)
DBA/2J	MGP_DBA2J_G0011315	pseudogene	Chr18:21061015-21062495 (+)
FVB/NJ	MGP_FVBNJ_G0011320	pseudogene	Chr18:20820297-20821775 (+)
LP/J	MGP_LPJ_G0011385	pseudogene	Chr18:22155273-22156751 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011312	pseudogene	Chr18:24554035-24555515 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011677	pseudogene	Chr18:21797995-21799475 (+)
PWK/PhJ	MGP_PWKPhJ_G0010957	pseudogene	Chr18:21200938-21202418 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010779	pseudogene	Chr18:22040572-22042053 (+)
WSB/EiJ	MGP_WSBEiJ_G0011125	pseudogene	Chr18:21696211-21697689 (+)

Homology

• Gene Tree
  Gm7701
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000091363 (Evidence)
• NCBI Gene
  665586

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000091363	Ensembl Gene Model | MGI Sequence Detail	1479	C57BL/6J
transcript	ENSMUST00000163185	Ensembl | MGI Sequence Detail	1479	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7701:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5261	Chr18:24390411-24390437 (+)	-11 bp