Gm7825 Pseudogene Detail

Summary

• Symbol
  Gm7825
• Name
  predicted gene 7825

• Feature Type
  pseudogene
• IDs
  MGI:3646507
  NCBI Gene: 665856
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:94394810-94395225 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 43.12 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  212 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646507	pseudogene	Chr6:94394752-94396486 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013605	pseudogene	Chr6:96174914-96175329 (+)
A/J	MGP_AJ_G0013586	pseudogene	Chr6:92523516-92523931 (+)
AKR/J	MGP_AKRJ_G0013548	pseudogene	Chr6:95057247-95057662 (+)
BALB/cJ	MGP_BALBcJ_G0013567	pseudogene	Chr6:92475852-92476267 (+)
C3H/HeJ	MGP_C3HHeJ_G0013371	pseudogene	Chr6:89354334-89354749 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013952	pseudogene	Chr6:98595278-98595693 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013108	pseudogene	Chr6:95269720-95270136 (+)
CBA/J	MGP_CBAJ_G0013386	pseudogene	Chr6:102340177-102340592 (+)
DBA/2J	MGP_DBA2J_G0013466	pseudogene	Chr6:91672315-91672730 (+)
FVB/NJ	MGP_FVBNJ_G0013465	pseudogene	Chr6:90891684-90892099 (+)
LP/J	MGP_LPJ_G0013543	pseudogene	Chr6:96154186-96154601 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013478	pseudogene	Chr6:106309141-106309556 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013943	pseudogene	Chr6:94940834-94942038 (+)
PWK/PhJ	MGP_PWKPhJ_G0012913	pseudogene	Chr6:90676830-90677245 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012694	pseudogene	Chr6:93871854-93872268 (+)
WSB/EiJ	MGP_WSBEiJ_G0013156	pseudogene	Chr6:95407194-95407609 (+)

Homology

• Gene Tree
  Gm7825
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000107616 (Evidence)
• NCBI Gene
  665856

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000107616	Ensembl Gene Model | MGI Sequence Detail	416	C57BL/6J
transcript	ENSMUST00000204046	Ensembl | MGI Sequence Detail	416	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;