Gm7241 Pseudogene Detail

Summary

• Symbol
  Gm7241
• Name
  predicted pseudogene 7241

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3646637
  NCBI Gene: 638532
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:132212191-132212547 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 57.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646637	pseudogene	Chr1:132212127-132212623 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010346	pseudogene	Chr1:135759482-135760447 (+)
A/J	MGP_AJ_G0010335	pseudogene	Chr1:130727306-130727662 (+)
AKR/J	MGP_AKRJ_G0010305	pseudogene	Chr1:134575031-134575387 (+)
BALB/cJ	MGP_BALBcJ_G0010311	pseudogene	Chr1:131061193-131061549 (+)
C3H/HeJ	MGP_C3HHeJ_G0010245	pseudogene	Chr1:134723441-134723797 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011761	pseudogene	Chr19:44661903-44662259 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010214	pseudogene	Chr1:145607492-145607848 (+)
DBA/2J	MGP_DBA2J_G0010249	pseudogene	Chr1:129691395-129691751 (+)
FVB/NJ	MGP_FVBNJ_G0010272	pseudogene	Chr1:128322748-128323104 (+)
LP/J	MGP_LPJ_G0010332	pseudogene	Chr1:137068838-137069679 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010228	pseudogene	Chr1:151409620-151409976 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010137	pseudogene	Chr1:134323817-134326189 (+)

Homology

• Gene Tree
  Gm7241
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm7241
• Find Mice (IMSR)
  7 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  2

• Ensembl
  ENSMUSG00000089808 (Evidence)
• NCBI Gene
  638532

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000089808	Ensembl Gene Model | MGI Sequence Detail	357	C57BL/6J
transcript	ENSMUST00000159853	Ensembl | MGI Sequence Detail	357	Not Applicable
polypeptide	XP_036010734	RefSeq | MGI Sequence Detail	93	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45