Gm8317 Pseudogene Detail

Summary

• Symbol
  Gm8317
• Name
  predicted gene 8317

• Feature Type
  pseudogene
• IDs
  MGI:3646695
  NCBI Gene: 666834
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:46095533-46096003 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 23.55 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  115 from dbSNP Build 142
• Strain Annotations
  10

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646695	pseudogene	Chr14:46095512-46096003 (-)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0011096	pseudogene	Chr14:38348141-38348574 (-)
AKR/J	MGP_AKRJ_G0011054	pseudogene	Chr14:39843469-39843902 (-)
BALB/cJ	MGP_BALBcJ_G0011072	pseudogene	Chr14:38396135-38396568 (-)
C3H/HeJ	MGP_C3HHeJ_G0010971	pseudogene	Chr14:39644031-39644460 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010787	pseudogene	Chr14:36757823-36758287 (-)
CBA/J	MGP_CBAJ_G0010944	pseudogene	Chr14:42539706-42540135 (-)
DBA/2J	MGP_DBA2J_G0010991	pseudogene	Chr14:38251294-38251705 (-)
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0011337	pseudogene	Chr14:39382583-39383016 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010840	pseudogene	Chr14:39476263-39476696 (-)

Homology

• Gene Tree
  Gm8317
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8317
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00000084276 (Evidence)
• NCBI Gene
  666834

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084276	Ensembl Gene Model | MGI Sequence Detail	471	C57BL/6J
transcript	ENSMUST00000121261	Ensembl | MGI Sequence Detail	471	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;