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Gm5354 Pseudogene Detail
Summary
  • Symbol
    Gm5354
  • Name
    predicted gene 5354
  • Feature Type
    pseudogene
  • IDs
    MGI:3646767
    NCBI Gene: 384852
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr8:82034806-82035778 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 38.99 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646767
 pseudogene Chr8:82034607-82035796 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014089
 pseudogene Chr8:82063213-82064185 (-)
A/J MGP_AJ_G0014110
 pseudogene Chr8:78809800-78810772 (-)
AKR/J MGP_AKRJ_G0014037
 pseudogene Chr8:81146825-81147797 (-)
BALB/cJ MGP_BALBcJ_G0014064
 pseudogene Chr8:78925786-78926758 (-)
C3H/HeJ MGP_C3HHeJ_G0013894
 pseudogene Chr8:81785639-81786611 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014503
 pseudogene Chr8:85217629-85218601 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012338
 pseudogene Chr8:72774983-72775951 (-)
CAST/EiJ MGP_CASTEiJ_G0013552
 pseudogene Chr8:81151093-81152065 (-)
CBA/J MGP_CBAJ_G0013876
 pseudogene Chr8:88252027-88252999 (-)
DBA/2J MGP_DBA2J_G0013953
 pseudogene Chr8:78490811-78491783 (-)
FVB/NJ MGP_FVBNJ_G0013956
 pseudogene Chr8:77420182-77421154 (-)
LP/J MGP_LPJ_G0014040
 pseudogene Chr8:82132905-82133877 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013983
 pseudogene Chr8:90689597-90690569 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014481
 pseudogene Chr8:81171868-81172840 (-)
PWK/PhJ MGP_PWKPhJ_G0013362
 pseudogene Chr8:77729526-77730498 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013145
 pseudogene Chr8:79953385-79954356 (-)
WSB/EiJ MGP_WSBEiJ_G0013611
 pseudogene Chr8:81515714-81516686 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    32 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5354
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097949 Ensembl Gene Model | MGI Sequence Detail 973 C57BL/6J ±  kb
transcript ENSMUST00000182417 Ensembl | MGI Sequence Detail 973 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 36
    Phenotypes 32
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
  • Latest
    J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory