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Atg5lrt Gene Detail
Summary
  • Symbol
    Atg5lrt
  • Name
    ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G, retrotransposed
  • Synonyms
    Gm5426
Location &
Maps
more
  • Sequence Map
    Chr10:95972465-95972776 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 49.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    141 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646788
 protein coding gene Chr10:95972412-95972899 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017674
 protein coding gene Chr10:97759576-97761067 (+)
A/J MGP_AJ_G0017652
 protein coding gene Chr10:94307318-94307629 (+)
AKR/J MGP_AKRJ_G0017612
 protein coding gene Chr10:96995373-96995684 (+)
BALB/cJ MGP_BALBcJ_G0017616
 protein coding gene Chr10:94579512-94579823 (+)
C3H/HeJ MGP_C3HHeJ_G0017439
 protein coding gene Chr10:96995778-96996089 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018073
 protein coding gene Chr10:101177647-101177958 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015754
 protein coding gene Chr10:89834839-89835151 (+)
CAST/EiJ MGP_CASTEiJ_G0017002
 protein coding gene Chr10:97039361-97039672 (+)
CBA/J MGP_CBAJ_G0017409
 protein coding gene Chr10:105169472-105169783 (+)
DBA/2J MGP_DBA2J_G0017515
 protein coding gene Chr10:93382605-93382916 (+)
FVB/NJ MGP_FVBNJ_G0017507
 protein coding gene Chr10:92634008-92634319 (+)
LP/J MGP_LPJ_G0017589
 protein coding gene Chr10:98386277-98386588 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017537
 protein coding gene Chr10:106327132-106327443 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018110
 protein coding gene Chr10:96909351-96909662 (+)
PWK/PhJ MGP_PWKPhJ_G0016785
 protein coding gene Chr10:93509727-93510157 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016573
 protein coding gene Chr10:95755467-95755779 (+)
WSB/EiJ MGP_WSBEiJ_G0017062
 protein coding gene Chr10:96886780-96887091 (+)



Homology
more
  • Human Ortholog
    ATP5MG, ATP synthase membrane subunit g
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATP5MG, ATP synthase membrane subunit g
  • Synonyms
    ATP5JG, ATP5L
  • Links
    NCBI Gene ID: 10632
    neXtProt AC: NX_O75964
    UniProt: O75964

  • Chr Location
    11q23.3; chr11:118401346-118433278 (+)  GRCh38
  • Human Ortholog
    ATP5MGL, ATP synthase membrane subunit g like
  • Synonyms
    ATP5K2, ATP5L2
  • Links
    NCBI Gene ID: 267020
    neXtProt AC: NX_Q7Z4Y8
    UniProt: Q7Z4Y8

  • Chr Location
    22q13.2; chr22:42639803-42640601 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    8
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096486 Ensembl Gene Model | MGI Sequence Detail 312 C57BL/6J ±  kb
transcript ENSMUST00000074615 Ensembl | MGI Sequence Detail 312 Not Applicable  
polypeptide ENSMUSP00000136869 Ensembl | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006808 ATP synthase, F0 complex, subunit G, mitochondrial
    IPR016702 Mitochondrial ATP synthase subunit g, animal
Other
Accession IDs
less
MGI:7466669
References
more
  • Summaries
    All 13
    Gene Ontology 3
    Phenotypes 5
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory