Gm8587 Pseudogene Detail

Summary

• Symbol
  Gm8587
• Name
  predicted pseudogene 8587

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:3646799
  NCBI Gene: 667350
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:88055904-88056746 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 42.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  56 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646799	pseudogene	Chr12:88055812-88056824 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	MGP_AKRJ_G0010892	pseudogene	Chr12:88264260-88269903 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0010808	pseudogene	Chr12:88864893-88865732 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011182	pseudogene	Chr12:91241204-91242145 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009205	pseudogene	Chr1:88020479-88021440 (-)
CAST/EiJ	MGP_CASTEiJ_G0010638	pseudogene	Chr12:83111289-83112131 (-)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0010830	pseudogene	Chr12:85459531-85460370 (+)
FVB/NJ	MGP_FVBNJ_G0010842	pseudogene	Chr12:83815773-83816612 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0010824	pseudogene	Chr12:98116630-98117469 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011167	pseudogene	Chr12:87297161-87298003 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0010342	pseudogene	Chr12:82023601-82025626 (+)
WSB/EiJ	MGP_WSBEiJ_G0013752	pseudogene	Chr9:101857590-101858428 (-)

Homology

• Gene Tree
  Gm8587
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8587
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  2

• Ensembl
  ENSMUSG00000071207 (Evidence)
• NCBI Gene
  667350

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000071207	Ensembl Gene Model | MGI Sequence Detail	843	C57BL/6J
transcript	ENSMUST00000076538	Ensembl | MGI Sequence Detail	843	Not Applicable
polypeptide	XP_036013610	RefSeq | MGI Sequence Detail	309	C57BL/6J

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;