Gm9164 Pseudogene Detail

Summary

• Symbol
  Gm9164
• Name
  predicted gene 9164

• Feature Type
  pseudogene
• IDs
  MGI:3646866
  NCBI Gene: 668426
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:102931205-102932218 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 46.39 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646866	pseudogene	ChrX:102930994-102932236 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014694	pseudogene	ChrX:100577930-100579451 (-)
A/J	MGP_AJ_G0014701	pseudogene	ChrX:100472171-100473184 (-)
AKR/J	MGP_AKRJ_G0014627	pseudogene	ChrX:103548493-103549506 (-)
BALB/cJ	MGP_BALBcJ_G0014648	pseudogene	ChrX:99272388-99273401 (-)
C3H/HeJ	MGP_C3HHeJ_G0014479	pseudogene	ChrX:101028711-101029724 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015135	pseudogene	ChrX:103522465-103523478 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014107	pseudogene	ChrX:85290449-85291453 (-)
CBA/J	MGP_CBAJ_G0014471	pseudogene	ChrX:106739089-106740102 (-)
DBA/2J	MGP_DBA2J_G0014555	pseudogene	ChrX:99723774-99724787 (-)
FVB/NJ	MGP_FVBNJ_G0014536	pseudogene	ChrX:99028889-99029902 (-)
LP/J	MGP_LPJ_G0014652	pseudogene	ChrX:101571678-101572691 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014581	pseudogene	ChrX:111397790-111398803 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015101	pseudogene	ChrX:100251413-100252426 (-)
PWK/PhJ	MGP_PWKPhJ_G0013912	pseudogene	ChrX:82866849-82868061 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013708	pseudogene	ChrX:85999118-86000084 (-)
WSB/EiJ	MGP_WSBEiJ_G0014185	pseudogene	ChrX:98977746-98978750 (-)

Homology

• Gene Tree
  Gm9164
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  2

• Ensembl
  ENSMUSG00000082322 (Evidence)
• NCBI Gene
  668426

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082322	Ensembl Gene Model | MGI Sequence Detail	1014	C57BL/6J
transcript	ENSMUST00000118700	Ensembl | MGI Sequence Detail	1014	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm9164:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163969	ChrX:102932289-102932291 (-)	-72 bp