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Gm5311 Pseudogene Detail
Summary
  • Symbol
    Gm5311
  • Name
    predicted gene 5311
  • Feature Type
    pseudogene
  • IDs
    MGI:3646896
    NCBI Gene: 384440
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:79025099-79025807 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 34.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    173 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646896
 pseudogene Chr6:79025094-79025968 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013563
 pseudogene Chr6:79863137-79863845 (+)
A/J MGP_AJ_G0013547
 pseudogene Chr6:76806775-76807483 (+)
AKR/J MGP_AKRJ_G0013508
 pseudogene Chr6:79050439-79051147 (+)
BALB/cJ MGP_BALBcJ_G0013526
 pseudogene Chr6:76846275-76846983 (+)
C3H/HeJ MGP_C3HHeJ_G0013409
 pseudogene Chr6:105243781-105244489 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013914
 pseudogene Chr6:82021260-82021968 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0013068
 pseudogene Chr6:78983166-78983872 (+)
CBA/J MGP_CBAJ_G0013346
 pseudogene Chr6:85239871-85240579 (+)
DBA/2J MGP_DBA2J_G0013426
 pseudogene Chr6:76145385-76146093 (+)
FVB/NJ MGP_FVBNJ_G0013425
 pseudogene Chr6:75428152-75428860 (+)
LP/J MGP_LPJ_G0013499
 pseudogene Chr6:79849955-79850663 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0013436
 pseudogene Chr6:89330503-89331211 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013905
 pseudogene Chr6:78872557-78873265 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0012656
 pseudogene Chr6:77714149-77714862 (+)
WSB/EiJ MGP_WSBEiJ_G0013119
 pseudogene Chr6:79303828-79304536 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107772 Ensembl Gene Model | MGI Sequence Detail 709 C57BL/6J ±  kb
transcript ENSMUST00000203518 Ensembl | MGI Sequence Detail 709 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 1
  • Earliest
    J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory