Gm6373 Pseudogene Detail

Summary

• Symbol
  Gm6373
• Name
  predicted gene 6373

• Feature Type
  pseudogene
• IDs
  MGI:3647018
  NCBI Gene: 622956
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:140843851-140844210 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 62.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  79 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647018	pseudogene	ChrX:140843848-140844213 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014881	pseudogene	ChrX:139559472-139559831 (+)
A/J	MGP_AJ_G0014874	pseudogene	ChrX:138965717-138966076 (+)
AKR/J	MGP_AKRJ_G0014816	pseudogene	ChrX:143397433-143397792 (+)
BALB/cJ	MGP_BALBcJ_G0014830	pseudogene	ChrX:137199542-137199901 (+)
C3H/HeJ	MGP_C3HHeJ_G0014666	pseudogene	ChrX:139668701-139669060 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015314	pseudogene	ChrX:143568241-143568600 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012957	pseudogene	ChrX:130541366-130541729 (+)
CAST/EiJ	MGP_CASTEiJ_G0014279	pseudogene	ChrX:120387038-120387397 (+)
CBA/J	MGP_CBAJ_G0014655	pseudogene	ChrX:148057699-148058058 (+)
DBA/2J	MGP_DBA2J_G0014738	pseudogene	ChrX:138024575-138024934 (+)
FVB/NJ	MGP_FVBNJ_G0014721	pseudogene	ChrX:137251682-137252041 (+)
LP/J	MGP_LPJ_G0014835	pseudogene	ChrX:140506251-140506610 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014765	pseudogene	ChrX:155667358-155667717 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015299	pseudogene	ChrX:138868644-138869003 (+)
PWK/PhJ	MGP_PWKPhJ_G0014080	pseudogene	ChrX:117211608-117211967 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013863	pseudogene	ChrX:120904288-120904647 (+)
WSB/EiJ	MGP_WSBEiJ_G0014359	pseudogene	ChrX:137275747-137276106 (+)

Homology

• Gene Tree
  Gm6373
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000083026 (Evidence)
• NCBI Gene
  622956

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083026	Ensembl Gene Model | MGI Sequence Detail	360	C57BL/6J
transcript	ENSMUST00000121026	Ensembl | MGI Sequence Detail	360	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm6373:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr162231	ChrX:140843780-140843795 (+)	-63 bp