Gm6008 Pseudogene Detail

Summary

• Symbol
  Gm6008
• Name
  predicted gene 6008

• Feature Type
  pseudogene
• IDs
  MGI:3647051
  NCBI Gene: 546993
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:116402859-116403699 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 62.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647051	pseudogene	Chr7:116402859-116403734 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013995	pseudogene	Chr7:120554777-120555651 (-)
A/J	MGP_AJ_G0014055	pseudogene	Chr8:3905754-3906592 (-)
AKR/J	MGP_AKRJ_G0013990	pseudogene	Chr8:4028271-4029109 (-)
BALB/cJ	MGP_BALBcJ_G0014012	pseudogene	Chr8:4035507-4036345 (-)
C3H/HeJ	MGP_C3HHeJ_G0013846	pseudogene	Chr8:4176434-4177272 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014403	pseudogene	Chr7:125386367-125387240 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012298	pseudogene	Chr8:3607810-3608664 (-)
CAST/EiJ	MGP_CASTEiJ_G0013505	pseudogene	Chr8:3877484-3878323 (-)
CBA/J	MGP_CBAJ_G0013827	pseudogene	Chr8:4420364-4421202 (-)
DBA/2J	MGP_DBA2J_G0013905	pseudogene	Chr8:3896899-3897737 (-)
FVB/NJ	MGP_FVBNJ_G0013864	pseudogene	Chr7:115427385-115428258 (-)
LP/J	MGP_LPJ_G0013941	pseudogene	Chr7:122065937-122066811 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013890	pseudogene	Chr7:131150466-131151252 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014369	pseudogene	Chr7:119492381-119493254 (-)
PWK/PhJ	MGP_PWKPhJ_G0013320	pseudogene	Chr8:3856896-3857735 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013093	pseudogene	Chr8:3919431-3920273 (-)
WSB/EiJ	MGP_WSBEiJ_G0013567	pseudogene	Chr8:4046292-4047130 (-)

Homology

• Gene Tree
  Gm6008
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108740 (Evidence)
• NCBI Gene
  546993

Representative Sequences			Length	Strain/Species
genomic	546993	NCBI Gene Model | MGI Sequence Detail	841	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;