Gm5190 Pseudogene Detail

Summary

• Symbol
  Gm5190
• Name
  predicted gene 5190

• Feature Type
  pseudogene
• IDs
  MGI:3647068
  NCBI Gene: 382645
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:113360849-113361205 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 62.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647068	pseudogene	Chr12:113360841-113361347 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010953	pseudogene	Chr12:115954654-115955010 (+)
A/J	MGP_AJ_G0010959	pseudogene	Chr12:111434651-111435256 (+)
AKR/J	MGP_AKRJ_G0010914	pseudogene	Chr12:114697537-114697893 (+)
BALB/cJ	MGP_BALBcJ_G0010932	pseudogene	Chr12:111890062-111890418 (+)
C3H/HeJ	MGP_C3HHeJ_G0010830	pseudogene	Chr12:115182389-115182745 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011206	pseudogene	Chr12:119445848-119446204 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009810	pseudogene	Chr12:107835579-107835935 (+)
CAST/EiJ	MGP_CASTEiJ_G0010662	pseudogene	Chr12:110069541-110069897 (+)
CBA/J	MGP_CBAJ_G0010803	pseudogene	Chr12:124062948-124063304 (+)
DBA/2J	MGP_DBA2J_G0010852	pseudogene	Chr12:110934042-110934398 (+)
FVB/NJ	MGP_FVBNJ_G0010865	pseudogene	Chr12:109773656-109774012 (+)
LP/J	MGP_LPJ_G0010936	pseudogene	Chr12:115754219-115754575 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010846	pseudogene	Chr12:127156272-127156628 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011192	pseudogene	Chr12:114185360-114185716 (+)
PWK/PhJ	MGP_PWKPhJ_G0010546	pseudogene	Chr12:105624104-105624460 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010365	pseudogene	Chr12:108368225-108368783 (+)
WSB/EiJ	MGP_WSBEiJ_G0010706	pseudogene	Chr12:115123805-115124161 (+)

Homology

• Gene Tree
  Gm5190
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102832 (Evidence)
• NCBI Gene
  382645

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102832	Ensembl Gene Model | MGI Sequence Detail	357	C57BL/6J
transcript	ENSMUST00000192434	Ensembl | MGI Sequence Detail	357	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;