Gm7626 Pseudogene Detail

Summary

• Symbol
  Gm7626
• Name
  predicted gene 7626

• Feature Type
  pseudogene
• IDs
  MGI:3647116
  NCBI Gene: 665409
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:165870908-165871260 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 73.40 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647116	pseudogene	Chr1:165870846-165871281 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010427	pseudogene	Chr1:171563067-171563419 (-)
A/J	MGP_AJ_G0010417	pseudogene	Chr1:164576049-164576401 (-)
AKR/J	MGP_AKRJ_G0010385	pseudogene	Chr1:169543913-169544265 (-)
BALB/cJ	MGP_BALBcJ_G0010392	pseudogene	Chr1:165055770-165056122 (-)
C3H/HeJ	MGP_C3HHeJ_G0010324	pseudogene	Chr1:169767225-169767577 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010665	pseudogene	Chr1:177315989-177316341 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009344	pseudogene	Chr1:156451282-156451636 (-)
CAST/EiJ	MGP_CASTEiJ_G0010145	pseudogene	Chr1:169362128-169362485 (-)
CBA/J	MGP_CBAJ_G0010294	pseudogene	Chr1:183623915-183624267 (-)
DBA/2J	MGP_DBA2J_G0010325	pseudogene	Chr1:163444025-163444382 (-)
FVB/NJ	MGP_FVBNJ_G0010350	pseudogene	Chr1:161881318-161881674 (-)
LP/J	MGP_LPJ_G0010410	pseudogene	Chr1:172646165-172646517 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010307	pseudogene	Chr1:191077090-191077442 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010630	pseudogene	Chr1:169408571-169408923 (-)
PWK/PhJ	MGP_PWKPhJ_G0010047	pseudogene	Chr1:162649025-162649382 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009861	pseudogene	Chr1:168254839-168255196 (-)
WSB/EiJ	MGP_WSBEiJ_G0010214	pseudogene	Chr1:169550638-169550994 (-)

Homology

• Gene Tree
  Gm7626
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Gm7626
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000102890 (Evidence)
• NCBI Gene
  665409

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102890	Ensembl Gene Model | MGI Sequence Detail	353	C57BL/6J
transcript	ENSMUST00000195801	Ensembl | MGI Sequence Detail	353	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 8

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;