About   Help   FAQ
Defa-ps12 Pseudogene Detail
Summary
  • Symbol
    Defa-ps12
  • Name
    defensin, alpha, pseudogene 12
  • Feature Type
    pseudogene
  • IDs
    MGI:3647175
    NCBI Gene: 654452
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr8:19260478-19262776 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 10.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    222 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647175
 pseudogene Chr8:19260478-19262783 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040660
 pseudogene Chr8:16686639-16689169 (+)
A/J MGP_AJ_G0040658
 pseudogene Chr8:16126233-16128763 (+)
AKR/J MGP_AKRJ_G0040586
 pseudogene Chr8:16608575-16611107 (+)
BALB/cJ MGP_BALBcJ_G0040649
 pseudogene Chr8:16241925-16244455 (+)
C3H/HeJ MGP_C3HHeJ_G0040287
 pseudogene Chr8:16801471-16804001 (+)
C57BL/6NJ MGP_C57BL6NJ_G0041345
 pseudogene Chr8:17230594-17233126 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039326
 pseudogene Chr8:16628742-16631259 (+)
CBA/J MGP_CBAJ_G0040253
 pseudogene Chr8:18001553-18004083 (+)
DBA/2J MGP_DBA2J_G0040466
 pseudogene Chr8:16068751-16071281 (+)
FVB/NJ MGP_FVBNJ_G0040390
 pseudogene Chr8:16072294-16074824 (+)
LP/J MGP_LPJ_G0040503
 pseudogene Chr8:16741921-16744452 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0040387
 pseudogene Chr8:18133839-18136369 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0041391
 pseudogene Chr8:16605132-16607664 (+)
PWK/PhJ MGP_PWKPhJ_G0038984
 pseudogene Chr8:16089666-16092211 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038692
 pseudogene Chr8:16538300-16540831 (+)
WSB/EiJ MGP_WSBEiJ_G0039578
 pseudogene Chr8:16700851-16703387 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 654452 NCBI Gene Model | MGI Sequence Detail 2299 C57BL/6J ±  kb
transcript NR_197399 RefSeq | MGI Sequence Detail 241 C57BL/6  
For the selected sequence
References
more
  • Summaries
    All 5
    Phenotypes 1
  • Earliest
    J:332494 Dong X, et al., Keratinocyte-derived defensins activate neutrophil-specific receptors Mrgpra2a/b to prevent skin dysbiosis and bacterial infection. Immunity. 2022 Jul 15;55(9):1645-1662
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory