Gm9159 Pseudogene Detail

Summary

• Symbol
  Gm9159
• Name
  predicted gene 9159

• Feature Type
  pseudogene
• IDs
  MGI:3647271
  NCBI Gene: 100504066
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:102641377-102641942 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 46.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647271	pseudogene	ChrX:102641352-102642033 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014688	pseudogene	ChrX:100263678-100264243 (+)
A/J	MGP_AJ_G0014696	pseudogene	ChrX:100187070-100187635 (+)
AKR/J	MGP_AKRJ_G0014621	pseudogene	ChrX:103211062-103211627 (+)
BALB/cJ	MGP_BALBcJ_G0014643	pseudogene	ChrX:98982147-98982712 (+)
C3H/HeJ	MGP_C3HHeJ_G0014473	pseudogene	ChrX:100717612-100718177 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015129	pseudogene	ChrX:103219528-103220093 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014102	pseudogene	ChrX:84989176-84989741 (+)
CBA/J	MGP_CBAJ_G0014465	pseudogene	ChrX:106409342-106409907 (+)
DBA/2J	MGP_DBA2J_G0014549	pseudogene	ChrX:99426582-99427147 (+)
FVB/NJ	MGP_FVBNJ_G0014530	pseudogene	ChrX:98734296-98734861 (+)
LP/J	MGP_LPJ_G0014646	pseudogene	ChrX:101280221-101280786 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014575	pseudogene	ChrX:111072023-111072588 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015096	pseudogene	ChrX:99936973-99937538 (+)
PWK/PhJ	MGP_PWKPhJ_G0013907	pseudogene	ChrX:82567298-82567863 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013703	pseudogene	ChrX:85697077-85697642 (+)
WSB/EiJ	MGP_WSBEiJ_G0014180	pseudogene	ChrX:98661200-98661765 (+)

Homology

• Gene Tree
  Gm9159
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080796 (Evidence)
• NCBI Gene
  100504066

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080796	Ensembl Gene Model | MGI Sequence Detail	566	C57BL/6J
transcript	ENSMUST00000120661	Ensembl | MGI Sequence Detail	566	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;