Gm5263 Pseudogene Detail

Summary

• Symbol
  Gm5263
• Name
  predicted gene 5263

• Feature Type
  pseudogene
• IDs
  MGI:3647343
  NCBI Gene: 383571
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:146296174-146296774 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 63.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647343	pseudogene	Chr1:146296033-146296912 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010376	pseudogene	Chr1:150861965-150862565 (+)
A/J	MGP_AJ_G0010365	pseudogene	Chr1:144809497-144810097 (+)
AKR/J	MGP_AKRJ_G0010336	pseudogene	Chr1:149277234-149277834 (+)
BALB/cJ	MGP_BALBcJ_G0010341	pseudogene	Chr1:145296670-145297270 (+)
C3H/HeJ	MGP_C3HHeJ_G0010274	pseudogene	Chr1:149400518-149401118 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010614	pseudogene	Chr1:155965990-155966590 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010092	pseudogene	Chr1:148832752-148833352 (+)
CBA/J	MGP_CBAJ_G0010243	pseudogene	Chr1:161512759-161513359 (+)
DBA/2J	MGP_DBA2J_G0010276	pseudogene	Chr1:143926734-143927334 (+)
FVB/NJ	MGP_FVBNJ_G0010303	pseudogene	Chr1:142366226-142366826 (+)
LP/J	MGP_LPJ_G0010362	pseudogene	Chr1:151854104-151854704 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010257	pseudogene	Chr1:168370595-168371195 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015042	pseudogene	ChrX:91752739-91753339 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm5263
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Gene trapped
  1
• Genomic Mutations
  2 involving Gm5263
• Incidental Mutations
  APF
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000090323 (Evidence)
• NCBI Gene
  383571

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000090323	Ensembl Gene Model | MGI Sequence Detail	601	C57BL/6J
transcript	ENSMUST00000163646	Ensembl | MGI Sequence Detail	601	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14