Gm8643 Pseudogene Detail

Summary

• Symbol
  Gm8643
• Name
  predicted gene 8643

• Feature Type
  pseudogene
• IDs
  MGI:3647458
  NCBI Gene: 108168917
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:74722025-74722649 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 33.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  224 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647458	pseudogene	Chr3:74722025-74722652 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012226	pseudogene	Chr3:74268182-74268805 (+)
A/J	MGP_AJ_G0012220	pseudogene	Chr3:71973884-71974508 (+)
AKR/J	MGP_AKRJ_G0012186	pseudogene	Chr3:73602809-73603432 (+)
BALB/cJ	MGP_BALBcJ_G0012200	pseudogene	Chr3:71948582-71949206 (+)
C3H/HeJ	MGP_C3HHeJ_G0012072	pseudogene	Chr3:73910303-73910927 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012516	pseudogene	Chr3:77217593-77218217 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010913	pseudogene	Chr3:67889723-67890320 (+)
CAST/EiJ	MGP_CASTEiJ_G0011847	pseudogene	Chr3:73869009-73869632 (+)
CBA/J	MGP_CBAJ_G0012047	pseudogene	Chr3:79649555-79650179 (+)
DBA/2J	MGP_DBA2J_G0012104	pseudogene	Chr3:71542665-71543288 (+)
FVB/NJ	MGP_FVBNJ_G0012107	pseudogene	Chr3:69960930-69961553 (+)
LP/J	MGP_LPJ_G0012175	pseudogene	Chr3:75288453-75289076 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012109	pseudogene	Chr3:85409899-85410523 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012521	pseudogene	Chr3:73410757-73411380 (+)
PWK/PhJ	MGP_PWKPhJ_G0011691	pseudogene	Chr3:71256980-71257603 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011508	pseudogene	Chr3:72545684-72546308 (+)
WSB/EiJ	MGP_WSBEiJ_G0011877	pseudogene	Chr3:73702469-73703093 (+)

Homology

• Gene Tree
  Gm8643
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm8643
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102809 (Evidence)
• NCBI Gene
  108168917

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102809	Ensembl Gene Model | MGI Sequence Detail	625	C57BL/6J
transcript	ENSMUST00000195228	Ensembl | MGI Sequence Detail	625	Not Applicable

References

• Summaries
  All 8

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426