Gm8641 Pseudogene Detail

Summary

• Symbol
  Gm8641
• Name
  predicted gene 8641

• Feature Type
  pseudogene
• IDs
  MGI:3647459
  NCBI Gene: 667456
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:99828617-99829442 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 52.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  214 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647459	pseudogene	Chr9:99828279-99829605 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014234	pseudogene	Chr9:101339242-101340067 (-)
A/J	MGP_AJ_G0014250	pseudogene	Chr9:97767988-97769044 (-)
AKR/J	MGP_AKRJ_G0014175	pseudogene	Chr9:100148692-100152002 (-)
BALB/cJ	MGP_BALBcJ_G0014200	pseudogene	Chr9:97457578-97458403 (-)
C3H/HeJ	MGP_C3HHeJ_G0014031	pseudogene	Chr9:100564956-100565781 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014653	pseudogene	Chr9:104249871-104250696 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010160	pseudogene	Chr17:21911841-21912632 (+)
CAST/EiJ	MGP_CASTEiJ_G0013686	pseudogene	Chr9:100359216-100360028 (-)
CBA/J	MGP_CBAJ_G0014012	pseudogene	Chr9:107824512-107825337 (-)
DBA/2J	MGP_DBA2J_G0014097	pseudogene	Chr9:97257074-97257899 (-)
FVB/NJ	MGP_FVBNJ_G0014096	pseudogene	Chr9:96075246-96076071 (-)
LP/J	MGP_LPJ_G0014184	pseudogene	Chr9:101580427-101581252 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014131	pseudogene	Chr9:109728650-109729475 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014624	pseudogene	Chr9:100382010-100384822 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0013289	pseudogene	Chr9:100433816-100434641 (-)
WSB/EiJ	MGP_WSBEiJ_G0013745	pseudogene	Chr9:100273996-100274821 (-)

Homology

• Gene Tree
  Gm8641
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm8641
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000099631 (Evidence)
• NCBI Gene
  667456

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099631	Ensembl Gene Model | MGI Sequence Detail	826	C57BL/6J
transcript	ENSMUST00000186995	Ensembl | MGI Sequence Detail	826	Not Applicable

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;