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Amd-ps5 Pseudogene Detail
Summary
  • Symbol
    Amd-ps5
  • Name
    S-adenosylmethionine decarboxylase, pseudogene 5
  • Synonyms
    EG667840
  • Feature Type
    pseudogene
  • IDs
    MGI:3647577
    NCBI Gene: 667840
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:70304020-70305008 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    68 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647577
 pseudogene Chr6:70303526-70306872 (+)
129S1/SvImJ MGP_129S1SvImJ_G0013535
 pseudogene Chr6:70492616-70493514 (+)
A/J MGP_AJ_G0013524
 pseudogene Chr6:67937969-67938958 (+)
AKR/J MGP_AKRJ_G0014877
 pseudogene ChrX:157132733-157133864 (+)
BALB/cJ MGP_BALBcJ_G0013501
 pseudogene Chr6:67850377-67852022 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0012945
 pseudogene Chr4:51581206-51582771 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012376
 pseudogene Chr9:20707406-20708351 (-)
CAST/EiJ MGP_CASTEiJ_G0014334
 pseudogene ChrX:132505148-132506157 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0012947
 pseudogene Chr4:49426971-49428622 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0013180
 pseudogene Chr9:22194942-22195943 (-)
WSB/EiJ MGP_WSBEiJ_G0013639
 pseudogene Chr9:21876951-21877953 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    16
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000105114 Ensembl Gene Model | MGI Sequence Detail 989 C57BL/6J ±  kb
transcript ENSMUST00000198406 Ensembl | MGI Sequence Detail 989 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 4
  • Earliest
    J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory