Btf3-ps2 Pseudogene Detail

Summary

• Symbol
  Btf3-ps2
• Name
  basic transcription factor 3, pseudogene 2
• Synonyms
  Gm7613

• Feature Type
  pseudogene
• IDs
  MGI:3647731
  NCBI Gene: 118567709
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:59674000-59674486 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 32.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647731	pseudogene	Chr9:59673737-59679979 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014150	pseudogene	Chr9:59142043-59142529 (-)
A/J	MGP_AJ_G0014168	pseudogene	Chr9:57239273-57239770 (-)
AKR/J	MGP_AKRJ_G0014092	pseudogene	Chr9:58570346-58570832 (-)
BALB/cJ	MGP_BALBcJ_G0014117	pseudogene	Chr9:56968571-56969057 (-)
C3H/HeJ	MGP_C3HHeJ_G0013948	pseudogene	Chr9:59051136-59051622 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014561	pseudogene	Chr9:60769984-60770470 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009901	pseudogene	Chr13:90638794-90639277 (+)
CAST/EiJ	MGP_CASTEiJ_G0013608	pseudogene	Chr9:59147466-59147947 (-)
CBA/J	MGP_CBAJ_G0013931	pseudogene	Chr9:62909215-62909701 (-)
DBA/2J	MGP_DBA2J_G0014014	pseudogene	Chr9:57052200-57052686 (-)
FVB/NJ	MGP_FVBNJ_G0014013	pseudogene	Chr9:56311672-56312158 (-)
LP/J	MGP_LPJ_G0014097	pseudogene	Chr9:59433255-59433741 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014043	pseudogene	Chr9:64345770-64346256 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014534	pseudogene	Chr9:58585279-58585765 (-)
PWK/PhJ	MGP_PWKPhJ_G0013424	pseudogene	Chr9:57116710-57117286 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013210	pseudogene	Chr9:58841279-58841760 (-)
WSB/EiJ	MGP_WSBEiJ_G0013666	pseudogene	Chr9:58519508-58519994 (-)

Homology

• Gene Tree
  Btf3-ps2
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087239 (Evidence)
• NCBI Gene
  118567709

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087239	Ensembl Gene Model | MGI Sequence Detail	487	C57BL/6J
transcript	ENSMUST00000139070	Ensembl | MGI Sequence Detail	487	Not Applicable

Other
Accession IDs

MGI:6450939

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;