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Igkv9-120 Gene Detail
Summary
  • Symbol
    Igkv9-120
  • Name
    immunoglobulin kappa chain variable 9-120
  • Synonyms
    Gm5571
  • Feature Type
    gene segment
  • IDs
    MGI:3647784
    NCBI Gene: 434025
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:68026967-68027438 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 31.05 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    218 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647784
 gene segment Chr6:68026967-68027440 (+)
129S1/SvImJ MGP_129S1SvImJ_G0000122
 gene segment Chr6:68227805-68228278 (+)
A/J MGP_AJ_G0000109
 gene segment Chr6:65135769-65136235 (-)
AKR/J MGP_AKRJ_G0000115
 gene segment Chr6:67166915-67167381 (-)
BALB/cJ MGP_BALBcJ_G0000103
 gene segment Chr6:65503817-65504283 (-)
C3H/HeJ MGP_C3HHeJ_G0000147
 gene segment Chr6:117018685-117019151 (+)
C57BL/6NJ MGP_C57BL6NJ_G0000158
 gene segment Chr6:69831485-69831958 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0000117
 gene segment Chr6:67434200-67434673 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0000108
 gene segment Chr6:64364264-64364737 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0000139
 gene segment Chr6:67157759-67158232 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0000115
 gene segment Chr6:67355679-67356152 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
  • UniProt
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 434025 NCBI Gene Model | MGI Sequence Detail 472 C57BL/6J ±  kb
transcript Z95478 GenBank | ENA | DDBJ | MGI Sequence Detail 828 Not Specified  
polypeptide P01639 UniProt | EBI | MGI Sequence Detail 130 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less

  • Microarray probesets 5
References
more
  • Summaries
    All 17
    Gene Ontology 2
  • Earliest
    J:28604 Seidman JG, et al., A kappa-immunoglobulin gene is formed by site-specific recombination without further somatic mutation. Nature. 1979 Aug 2;280(5721):370-5
  • Latest
    J:164271 Arnhold J, et al., Human myeloperoxidase in innate and acquired immunity. Arch Biochem Biophys. 2010 Aug 1;500(1):92-106
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory