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Gm6564 Pseudogene Detail
Summary
  • Symbol
    Gm6564
  • Name
    predicted pseudogene 6564
  • Feature Type
    pseudogene
  • IDs
    MGI:3647928
    NCBI Gene: 625219
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:23136393-23137011 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 10.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647928
 pseudogene Chr5:23136314-23137073 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013004
 pseudogene Chr5:20519375-20519991 (-)
A/J MGP_AJ_G0012991
 pseudogene Chr5:19864223-19864841 (-)
AKR/J MGP_AKRJ_G0012957
 pseudogene Chr5:20627148-20627766 (-)
BALB/cJ MGP_BALBcJ_G0012970
 pseudogene Chr5:20340302-20340918 (-)
C3H/HeJ MGP_C3HHeJ_G0012821
 pseudogene Chr5:20716791-20717409 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013329
 pseudogene Chr5:22003998-22004616 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011527
 pseudogene Chr5:17864964-17865569 (-)
CAST/EiJ MGP_CASTEiJ_G0012551
 pseudogene Chr5:20025015-20025633 (-)
CBA/J MGP_CBAJ_G0012789
 pseudogene Chr5:22297416-22300417 (-)
DBA/2J MGP_DBA2J_G0012865
 pseudogene Chr5:20161196-20161812 (-)
FVB/NJ MGP_FVBNJ_G0012870
 pseudogene Chr5:19559284-19559900 (-)
LP/J MGP_LPJ_G0012936
 pseudogene Chr5:20926620-20927236 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012884
 pseudogene Chr5:23504547-23505163 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013330
 pseudogene Chr5:20237294-20237910 (-)
PWK/PhJ MGP_PWKPhJ_G0012374
 pseudogene Chr5:19188381-19188999 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0012591
 pseudogene Chr5:20335987-20336603 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Gm6564
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000060879 Ensembl Gene Model | MGI Sequence Detail 619 C57BL/6J ±  kb
transcript ENSMUST00000075377 Ensembl | MGI Sequence Detail 619 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 13
    Diseases 1
    Phenotypes 9
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:119563 Alt B, et al., Arteries define the position of the thyroid gland during its developmental relocalisation. Development. 2006 Oct;133(19):3797-804
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory