Gm8858 Pseudogene Detail

Summary

• Symbol
  Gm8858
• Name
  predicted gene 8858

• Feature Type
  pseudogene
• IDs
  MGI:3648007
  NCBI Gene: 667883
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:87432165-87432506 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 39.95 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648007	pseudogene	ChrX:87432165-87432506 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014578	pseudogene	ChrX:84596083-84596424 (+)
A/J	MGP_AJ_G0014589	pseudogene	ChrX:84678095-84678436 (+)
AKR/J	MGP_AKRJ_G0014512	pseudogene	ChrX:86878142-86878483 (+)
BALB/cJ	MGP_BALBcJ_G0014541	pseudogene	ChrX:83379193-83379534 (+)
C3H/HeJ	MGP_C3HHeJ_G0014373	pseudogene	ChrX:84834296-84834637 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015017	pseudogene	ChrX:87169597-87169938 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014000	pseudogene	ChrX:69777255-69777595 (+)
CBA/J	MGP_CBAJ_G0014360	pseudogene	ChrX:89608297-89608638 (+)
DBA/2J	MGP_DBA2J_G0014440	pseudogene	ChrX:84029432-84029773 (+)
FVB/NJ	MGP_FVBNJ_G0014428	pseudogene	ChrX:83415361-83415702 (+)
LP/J	MGP_LPJ_G0014538	pseudogene	ChrX:85350699-85351040 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014473	pseudogene	ChrX:93583817-93584158 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014984	pseudogene	ChrX:84260285-84260626 (+)
PWK/PhJ	MGP_PWKPhJ_G0013806	pseudogene	ChrX:67742309-67742652 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013604	pseudogene	ChrX:70829212-70829553 (+)
WSB/EiJ	MGP_WSBEiJ_G0014075	pseudogene	ChrX:83176695-83177036 (+)

Homology

• Gene Tree
  Gm8858
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000081877 (Evidence)
• NCBI Gene
  667883

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081877	Ensembl Gene Model | MGI Sequence Detail	342	C57BL/6J
transcript	ENSMUST00000118259	Ensembl | MGI Sequence Detail	342	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;