Gm9208 Pseudogene Detail

Summary

• Symbol
  Gm9208
• Name
  predicted gene 9208

• Feature Type
  pseudogene
• IDs
  MGI:3648125
  NCBI Gene: 102637393
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:106322621-106323568 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 47.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  82 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648125	pseudogene	ChrX:106322327-106323646 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014719	pseudogene	ChrX:104114722-104115669 (-)
A/J	MGP_AJ_G0014724	pseudogene	ChrX:103947289-103948236 (-)
AKR/J	MGP_AKRJ_G0014655	pseudogene	ChrX:107214475-107215422 (-)
BALB/cJ	MGP_BALBcJ_G0014673	pseudogene	ChrX:102700426-102701373 (-)
C3H/HeJ	MGP_C3HHeJ_G0014507	pseudogene	ChrX:104581413-104582360 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015160	pseudogene	ChrX:107130163-107131110 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014127	pseudogene	ChrX:88672361-88673308 (-)
CBA/J	MGP_CBAJ_G0014499	pseudogene	ChrX:110463999-110464946 (-)
DBA/2J	MGP_DBA2J_G0014581	pseudogene	ChrX:103174311-103175258 (-)
FVB/NJ	MGP_FVBNJ_G0014561	pseudogene	ChrX:102514738-102515685 (-)
LP/J	MGP_LPJ_G0014675	pseudogene	ChrX:105066425-105067372 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014609	pseudogene	ChrX:115240833-115241780 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015129	pseudogene	ChrX:103688746-103689693 (-)
PWK/PhJ	MGP_PWKPhJ_G0013931	pseudogene	ChrX:86216620-86217567 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013727	pseudogene	ChrX:89471120-89472066 (-)
WSB/EiJ	MGP_WSBEiJ_G0014207	pseudogene	ChrX:102435691-102436638 (-)

Homology

• Gene Tree
  Gm9208
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000080939 (Evidence)
• NCBI Gene
  102637393

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080939	Ensembl Gene Model | MGI Sequence Detail	948	C57BL/6J
transcript	ENSMUST00000120468	Ensembl | MGI Sequence Detail	948	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;