Gm6300 Pseudogene Detail

Summary

• Symbol
  Gm6300
• Name
  predicted gene 6300

• Feature Type
  pseudogene
• IDs
  MGI:3648364
  NCBI Gene: 622229
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:14428177-14439299 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 3.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  304 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648364	pseudogene	Chr3:14428177-14442647 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040287	pseudogene	Chr3:11463188-11478645 (+)
A/J	MGP_AJ_G0040266	pseudogene	Chr3:11478408-11493085 (+)
AKR/J	MGP_AKRJ_G0040203	pseudogene	Chr3:11458198-11474673 (+)
BALB/cJ	MGP_BALBcJ_G0040268	pseudogene	Chr3:11204885-11221061 (+)
C3H/HeJ	MGP_C3HHeJ_G0039903	pseudogene	Chr3:11786322-11801158 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040859	pseudogene	Chr3:12264563-12283777 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037287	pseudogene	Chr3:9852650-9867112 (+)
CAST/EiJ	MGP_CASTEiJ_G0038984	pseudogene	Chr3:11818594-11832637 (+)
CBA/J	MGP_CBAJ_G0039869	pseudogene	Chr3:12454318-12480949 (+)
DBA/2J	MGP_DBA2J_G0040068	pseudogene	Chr3:11051262-11065334 (+)
FVB/NJ	MGP_FVBNJ_G0040023	pseudogene	Chr3:10871931-10888200 (+)
LP/J	MGP_LPJ_G0040115	pseudogene	Chr3:12052178-12067203 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040019	pseudogene	Chr3:14203650-14218350 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040958	pseudogene	Chr3:11290868-11306065 (+)
PWK/PhJ	MGP_PWKPhJ_G0038680	pseudogene	Chr3:11179851-11195661 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038375	pseudogene	Chr3:11349980-11366387 (+)
WSB/EiJ	MGP_WSBEiJ_G0039211	pseudogene	Chr3:11328950-11345365 (+)

Homology

• Gene Tree
  Gm6300
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000104375 (Evidence)
• NCBI Gene
  622229

Representative Sequences			Length	Strain/Species
genomic	622229	NCBI Gene Model | MGI Sequence Detail	11123	C57BL/6J
transcript	NR_033591	RefSeq | MGI Sequence Detail	2217	C57BL/6

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;